Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Trh-M-400144), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
652 Tdc2-F-200010 VIII 0.48
865 TH-F-000025 X 0.46
146 Trh-M-200088 VIII 0.37
903 VGlut-F-000273 X 0.29
532 Cha-F-300093 X 0.28

Cluster composition

This cluster has 15 neurons. The exemplar of this cluster (Trh-M-400144) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Trh-M-400144 2241 TPHMARCM-M001728_seg001 Trh-Gal4 M 28883.09 1.00
Trh-M-900059 2193 TPHMARCM-M001683_seg001 Trh-Gal4 M 18311.26 0.65
Trh-M-500202 2228 TPHMARCM-M001715_seg001 Trh-Gal4 M 18176.73 0.67
Trh-M-500079 2798 TPHMARCM-1026M_seg1 Trh-Gal4 M 17938.79 0.65
Trh-M-400085 2856 TPHMARCM-1084M_seg1 Trh-Gal4 M 19056.67 0.67
Trh-M-400004 3383 TPHMARCM-227M_seg2 Trh-Gal4 M 18074.89 0.65
Gad1-F-000064 4030 GadMARCM-F000637_seg001 Gad1-Gal4 F 13751.74 0.55
Gad1-F-000102 4117 GadMARCM-F000703_seg001 Gad1-Gal4 F 7178.65 0.35
Cha-F-300249 5622 ChaMARCM-F000905_seg001 Cha-Gal4 F 11629.71 0.53
Cha-F-000021 10177 ChaMARCM-F000106_seg001 Cha-Gal4 F 12072.83 0.55
Trh-F-300142 12427 TPHMARCM-1222F_seg1 Trh-Gal4 F 17456.86 0.66
Trh-F-400056 14164 TPHMARCM-591F_seg1 Trh-Gal4 F 19449.39 0.68
Trh-F-500053 14171 TPHMARCM-609F_seg1 Trh-Gal4 F 17481.89 0.65
Trh-F-400060 14178 TPHMARCM-615F_seg1 Trh-Gal4 F 18568.39 0.64
Trh-F-500068 14220 TPHMARCM-667F_seg1 Trh-Gal4 F 19412.30 0.69