Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-200117), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
141 Trh-M-400106 XIX 0.75
1028 VGlut-F-000067 XIV 0.69
753 VGlut-F-600178 XIV 0.62
887 Trh-F-100046 XIX 0.60
1018 VGlut-F-300036 XIV 0.56
83 TH-M-300024 XIX 0.51

Cluster composition

This cluster has 12 neurons. The exemplar of this cluster (VGlut-F-200117) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-200117 16222 DvGlutMARCM-F598_seg1 VGlut-Gal4 F 41639.02 1.00
VGlut-F-000679 5876 DvGlutMARCM-F004558_seg001 VGlut-Gal4 F 30006.59 0.73
VGlut-F-500803 6525 DvGlutMARCM-F004295_seg001 VGlut-Gal4 F 27179.24 0.68
VGlut-F-600706 6775 DvGlutMARCM-F003974_seg002 VGlut-Gal4 F 26556.45 0.65
VGlut-F-400780 7946 DvGlutMARCM-F003779_seg001 VGlut-Gal4 F 29071.96 0.72
VGlut-F-300473 9329 DvGlutMARCM-F003166_seg002 VGlut-Gal4 F 30014.43 0.73
VGlut-F-300492 9405 DvGlutMARCM-F003223_seg001 VGlut-Gal4 F 28632.61 0.73
Gad1-F-500026 10510 GadMARCM-F000156_seg002 Gad1-Gal4 F 29435.39 0.72
Gad1-F-500027 10511 GadMARCM-F000157_seg001 Gad1-Gal4 F 29799.81 0.72
VGlut-F-600497 11648 DvGlutMARCM-F002223_seg001 VGlut-Gal4 F 27985.94 0.69
VGlut-F-500388 11944 DvGlutMARCM-F002478_seg001 VGlut-Gal4 F 29644.17 0.69
Trh-F-300036 14040 TPHMARCM-330F_seg1 Trh-Gal4 F 29291.04 0.71