Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-000177), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
1038 VGlut-F-000111 X 0.39
939 VGlut-F-400341 X 0.37
268 Cha-F-200340 X 0.35
750 VGlut-F-400641 X 0.33
1031 VGlut-F-400089 X 0.28

Cluster composition

This cluster has 5 neurons. The exemplar of this cluster (VGlut-F-000177) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-000177 16208 DvGlutMARCM-F587-X2_seg2 VGlut-Gal4 F 54133.01 1.00
Cha-F-000347 4369 ChaMARCM-F001425_seg001 Cha-Gal4 F 19078.38 0.41
Cha-F-200200 4867 ChaMARCM-F000988_seg001 Cha-Gal4 F 37025.15 0.69
Cha-F-200242 5136 ChaMARCM-F001187_seg001 Cha-Gal4 F 37113.66 0.70
VGlut-F-000340 15017 DvGlutMARCM-F1358_seg1 VGlut-Gal4 F 39935.32 0.71