Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-400066), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
775 VGlut-F-500422 II 0.76
678 Gad1-F-200035 II 0.62
509 VGlut-F-200536 VII 0.61
228 Cha-F-500191 II 0.44
640 fru-F-500062 II 0.44

Cluster composition

This cluster has 20 neurons. The exemplar of this cluster (VGlut-F-400066) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-400066 15954 DvGlutMARCM-F347_seg1 VGlut-Gal4 F 112377.53 1.00
fru-M-400007 1778 FruMARCM-M000295_seg002 fru-Gal4 M 74992.92 0.55
fru-F-500276 3773 FruMARCM-F002397_seg002 fru-Gal4 F 20081.57 0.19
Cha-F-500178 3838 ChaMARCM-F001513_seg001 Cha-Gal4 F 41088.44 0.57
Cha-F-000291 4176 ChaMARCM-F001283_seg001 Cha-Gal4 F 59700.11 0.55
Cha-F-000361 4420 ChaMARCM-F001467_seg003 Cha-Gal4 F 38771.03 0.48
Cha-F-000255 5173 ChaMARCM-F001213_seg002 Cha-Gal4 F 55702.61 0.51
Cha-F-200135 5309 ChaMARCM-F000691_seg001 Cha-Gal4 F 44169.44 0.35
Cha-F-400183 5469 ChaMARCM-F000799_seg005 Cha-Gal4 F 48578.64 0.61
Cha-F-200189 5686 ChaMARCM-F000945_seg001 Cha-Gal4 F 63210.88 0.44
VGlut-F-200587 5707 DvGlutMARCM-F004417_seg003 VGlut-Gal4 F 45083.63 0.39
VGlut-F-400885 6458 DvGlutMARCM-F004243_seg001 VGlut-Gal4 F 77710.20 0.74
Cha-F-600056 7583 ChaMARCM-F000439_seg002 Cha-Gal4 F 80204.32 0.62
VGlut-F-000527 8957 DvGlutMARCM-F003518_seg002 VGlut-Gal4 F 80101.85 0.59
Cha-F-700015 10167 ChaMARCM-F000098_seg002 Cha-Gal4 F 43003.85 0.46
Gad1-F-000012 10666 GadMARCM-F000174_seg003 Gad1-Gal4 F 56784.33 0.65
VGlut-F-000469 10842 DvGlutMARCM-F002880_seg001 VGlut-Gal4 F 73429.61 0.71
Gad1-F-200066 11251 GadMARCM-F000231_seg001 Gad1-Gal4 F 64352.76 0.66
VGlut-F-200397 11765 DvGlutMARCM-F002336_seg001 VGlut-Gal4 F 68673.86 0.63
VGlut-F-400580 12286 DvGlutMARCM-F002742_seg001 VGlut-Gal4 F 78998.25 0.74