Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-300041), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
917 VGlut-F-000193 VII 0.62
852 TH-F-100030 VII 0.61
686 VGlut-F-900065 VII 0.56
855 TH-F-200057 VIII 0.53
661 Tdc2-F-000027 VII 0.53
753 VGlut-F-600178 XIV 0.50

Cluster composition

This cluster has 16 neurons. The exemplar of this cluster (VGlut-F-300041) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-300041 15917 DvGlutMARCM-F312-X2_seg2 VGlut-Gal4 F 23940.16 1.00
TH-M-400001 3084 THMARCM-060M_seg1 TH-Gal4 M 16985.60 0.70
fru-F-500257 4812 FruMARCM-F002153_seg001 fru-Gal4 F 11915.00 0.47
Cha-F-200231 5125 ChaMARCM-F001180_seg001 Cha-Gal4 F 7591.93 0.38
VGlut-F-200550 6910 DvGlutMARCM-F004064_seg001 VGlut-Gal4 F 14482.33 0.33
VGlut-F-300584 6914 DvGlutMARCM-F004067_seg001 VGlut-Gal4 F 10754.52 0.40
VGlut-F-300597 7061 DvGlutMARCM-F004190_seg001 VGlut-Gal4 F 16819.48 0.69
Cha-F-000080 7688 ChaMARCM-F000510_seg001 Cha-Gal4 F 8045.74 0.46
VGlut-F-200390 11703 DvGlutMARCM-F002276_seg001 VGlut-Gal4 F 17001.94 0.72
VGlut-F-500409 11975 DvGlutMARCM-F002509_seg001 VGlut-Gal4 F 16371.92 0.71
VGlut-F-500466 12234 DvGlutMARCM-F002697_seg002 VGlut-Gal4 F 16921.55 0.71
TH-F-300087 13694 THMARCM-716F_seg TH-Gal4 F 16845.22 0.67
VGlut-F-300153 14493 DvGlutMARCM-F765_seg2 VGlut-Gal4 F 16422.75 0.70
VGlut-F-300255 15115 DvGlutMARCM-F1449_seg1 VGlut-Gal4 F 16947.72 0.70
VGlut-F-300267 15158 DvGlutMARCM-F1489_seg1 VGlut-Gal4 F 16579.34 0.71
VGlut-F-200041 15659 DvGlutMARCM-F071_seg1 VGlut-Gal4 F 16822.15 0.68