Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-100016), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
965 VGlut-F-100188 VI 0.49
348 Cha-F-200254 VI 0.43
646 Trh-F-000060 XVII 0.37
621 Gad1-F-500089 XVII 0.36
1042 VGlut-F-000143 VI 0.33

Cluster composition

This cluster has 10 neurons. The exemplar of this cluster (VGlut-F-100016) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-100016 15788 DvGlutMARCM-F196_seg1 VGlut-Gal4 F 39475.07 1.00
TH-M-000048 3346 THMARCM-643M_seg TH-Gal4 M 24366.70 0.54
Gad1-F-100082 4115 GadMARCM-F000700_seg001 Gad1-Gal4 F 23689.64 0.43
Cha-F-100129 4874 ChaMARCM-F000994_seg001 Cha-Gal4 F 16657.96 0.50
Cha-F-400208 5664 ChaMARCM-F000932_seg001 Cha-Gal4 F 17901.39 0.54
VGlut-F-300618 6474 DvGlutMARCM-F004256_seg001 VGlut-Gal4 F 11620.23 0.31
VGlut-F-300576 6893 DvGlutMARCM-F004048_seg002 VGlut-Gal4 F 18490.45 0.51
Cha-F-700087 7528 ChaMARCM-F000377_seg001 Cha-Gal4 F 16465.40 0.48
Cha-F-200050 8240 ChaMARCM-F000236_seg001 Cha-Gal4 F 17826.37 0.50
Gad1-F-400049 11381 GadMARCM-F000335_seg002 Gad1-Gal4 F 14230.38 0.46