Setting up AmiraDev to compile Felix's source hxskeletonize/hxgrapheditor

====== Amira 5.2.2 ======

  * Use Wizard to make a new amiradev folder e.g. ~/dev/amiradev this is $AMIRA_LOCAL
  * replace $AMIRA_LOCAL/src with checkout of felix's svn
  * Install binary qt 4.3.4 (qt-mac-opensource-4.3.4.dmg from trolltech/mirrors)
  * Get headers from qt tarball (qt-mac-opensource-src-4.3.4.tar.gz)
  * (or just compile/install qt-mac-opensource-src-4.3.4 rather than using binary installer)

<code>
AMIRA_LOCAL=/Users/jefferis/dev/amiradev # or wherever
cd $AMIRA_LOCAL
mv src src.orig # this is ok so long as there are no packages with conflicting names
git svn --username greg clone https://basfly.zoo.cam.ac.uk/repos/amira src

ln /usr/bin/moc $AMIRA_LOCAL/bin/arch-MacX-Optimize/

# or wherever the qt include files live
ln $HOME/dev/qt-mac-opensource-src-4.3.4/include /Applications/Amira-5.2.2/include/arch-MacX/qt 

cd hxskeletonize
make MAKE_CFG=Optimize
</code>
====== Amira 5.3 ======

  * Installed qt-mac-opensource-4.5.3.dmg (based on checking libs supplied with amira).  This goes into /Developer and /usr
  * made sure moc was relinked
  * Downloaded qt-mac-opensource-src-4.5.3.tgz (just want the headers)
  * ''ln -s $HOME/dev/Qt/qt-mac-opensource-src-4.5.3/include /Applications/Amira-5.3.0/include/arch-MacX/qt''
  * Currently not compiling because include files are not found.  Changing ''INCLUDES'' in **Package** file results in different complaints - it's as if only the last path in INCLUDES is used.

====== Amira 5.3.2 ======

  * Installed qt-mac-opensource-4.5.3.dmg (based on checking libs supplied with amira).  This goes into /Developer and /usr
  * made sure moc was relinked 
  * Downloaded qt-mac-opensource-src-4.5.3.tgz (just want the headers)
  * ''ln -s $HOME/dev/Qt/qt-mac-opensource-src-4.5.3/include /Applications/Amira-5.3.2/include/arch-MacX/qt''
  * run AmiraDev wizard to make build system
  * Change the "Package" file defined in the hxskeletonize (see git repo)
<code>
cd hxgrapheditor
make MAKE_CFG=Optimize
cd ..
cd hxskeletonize
make MAKE_CFG=Optimize
</code>