Differences

This shows you the differences between two versions of the page.

Link to this comparison view

warping_manual:calculating_an_initial_surface-based_registration_using_amira [2016/04/29 12:47] – created jefferiswarping_manual:calculating_an_initial_surface-based_registration_using_amira [2019/03/28 10:27] (current) – note about R installation jefferis
Line 14: Line 14:
   - These 16 numbers define a homogeneous affine transformation, which can now be used to make a CMTK registration.   - These 16 numbers define a homogeneous affine transformation, which can now be used to make a CMTK registration.
  
-In R+We carry out the last step in R:
 <code> <code>
 library(nat) library(nat)
Line 22: Line 22:
 write.cmtkreg(cmtk.mat2dof(m), "/path/to/my/reg/folder/Registration/affine/JFRC2_FLPO_20121214175357476_2097_01_ght.list") write.cmtkreg(cmtk.mat2dof(m), "/path/to/my/reg/folder/Registration/affine/JFRC2_FLPO_20121214175357476_2097_01_ght.list")
 </code> </code>
 +
 +You will need to have R and the nat package installed. See [[http://jefferis.github.io/nat]] for details.

Log In